Y-SNP calls for Olalde (2018) The Beaker phenomenon and the genomic…

Home Miscellanea Population Genomics Y-SNP calls for Olalde (2018) The Beaker phenomenon and the genomic…

Viewing 0 reply threads
  • Author
    Posts
    • #31306
      Carlos Quiles
      Keymaster

      Olalde, I., Brace, S., Allentoft, M. et al. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature 555, 190–196 (2018).

      https://doi.org/10.1038/nature25738

      Abstract:

      From around 2750 to 2500 BC, Bell Beaker pottery became widespread across western and central Europe, before it disappeared between 2200 and 1800 BC. The forces that propelled its expansion are a matter of long-standing debate, and there is support for both cultural diffusion and migration having a role in this process. Here we present genome-wide data from 400 Neolithic, Copper Age and Bronze Age Europeans, including 226 individuals associated with Beaker-complex artefacts. We detected limited genetic affinity between Beaker-complex-associated individuals from Iberia and central Europe, and thus exclude migration as an important mechanism of spread between these two regions. However, migration had a key role in the further dissemination of the Beaker complex. We document this phenomenon most clearly in Britain, where the spread of the Beaker complex introduced high levels of steppe-related ancestry and was associated with the replacement of approximately 90% of Britain’s gene pool within a few hundred years, continuing the east-to-west expansion that had brought steppe-related ancestry into central and northern Europe over the previous centuries.

      Accession number: PRJEB23635

      Batch Y-chromosome SNP Calls with Yleaf v. 2.3 from FASTQ files, bwa-mem with hg38 reference, and parameters r=1, q=0, b=0.

      Google Drive.

      Haplogroup.info.

      The following is a list of automated Y-DNA haplogroup predictions obtained with Clean tree v2:

      WARNING: Please note that the haplogroup prediction algorithm works best with modern DNA, and its strict requirements make the prediction rather impractical for ancient DNA – in fact, males usually turn out to have not enough quality for a reliable prediction.

      If anything, positive haplogroup predictions (especially under R1b and I2) will normally turn out to be wrong because they are based on few reads, due to the sample being either a) female or b) low coverage.

      The usual process for checking out Y-chromosome haplogroups in ancient DNA samples is as follows:

      1. Select the male individual you want to check out for in the Ancient DNA Dataset.
      2. Look up its library ID (object-ID) at ENA Browser search form (top right) to obtain the accession number(s) for the available sample(s) corresponding to that individual.
      3. Look for files obtained with Yleaf for that accession number(s); more specifically, look for individual Derived and Ancestral SNPs in the ACCESSION_NUMBER.out or ACCESSION_NUMBER.out.csv documents.

      When in doubt about a specific sample, you can ask a question in this thread.

      ERR2207159 NA NA 571994 680 0 0 0 0
      ERR2207140 NA NA 230775 1321 0.0 0.0 1.0 1.0
      ERR2207345 NA NA 439961 325 0 0 0 0
      ERR2207195 R1b1a1b1a1a2 R-P312*(xL1231,L356,BY247,Z2245,DF19,DF99,ZZ38) 1914754 12909 1.0 1.0 1.0 1.0
      ERR2206977 NA NA 2308480 13198 0 0 0 0
      ERR2207226 NA NA 2482623 14990 0.0 0.0 1.0 1.0
      ERR2207210 NA NA 3929640 18804 0.0 0.0 1.0 1.0
      ERR2207024 R1b1a1b R-CTS1415^^/etc*(xYSC0000054,S378,Y7369,S22641,L1231,L356,S6154,BY281,L743,BY404,FGC36538,BY357,FGC5782,FGC33399,L1315,A7911,FGC37083) 669782 567 1.0 1.0 1.0 1.0
      ERR2207338 NA NA 48384 71 0 0 0 0
      ERR2206981 NA NA 3725293 18334 0.0 0.0 1.0 1.0
      ERR2207315 R1a1a1~ R-M630/etc*(xCTS7288,FGC9991,F3044) 2634694 15017 1.0 1.0 1.0 1.0
      ERR2207282 NA NA 3088699 16000 0.0 0.0 1.0 0.0
      ERR2207271 NA NA 133048 116 0 0 0 0
      ERR2207263 R1b1a1b1a1 R-CTS7650*(xS263,L1231,FGC22528,L459,Z2248) 727260 618 1.0 1.0 1.0 1.0
      ERR2207156 NA NA 372435 1410 0 0 0 0
      ERR2207304 NA NA 1212541 7159 0.0 0.0 1.0 0.0
      ERR2206993 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,Z2248,DF99,Y18213,ZZ38) 2374058 13026 1.0 1.0 1.0 1.0
      ERR2207012 NA NA 3303633 17074 0.0 0.0 1.0 1.0
      ERR2206974 R1b1a1b1a1a2 R-P312*(xL1231,L356,L526,A91,BY2596,L238,DF19,Y18213,ZZ38) 1949739 11581 1.0 1.0 1.0 1.0
      ERR2207023 R1b1a1b1 R-L23*(xYSC0000054,L884.2,A6906,Y10790,Y7369,S1743,S22641,L1231,L356,S6154,FGC7998,L743,Z17836,Z21259,BY2743,FGC5654,S5456,FGC5782,FGC43488,L130,FGC37092) 618065 691 1.0 1.0 1.0 1.0
      ERR2207042 R1b1a1b R-CTS8336*(xS263,DF27,L356,CTS2501,L743,A11313,BY404,DC26,FGC5782,FGC33060,L1315) 287868 458 1.0 1.0 1.0 1.0
      ERR2207481 NA NA 170 1 0 0 0 0
      ERR2207101 NA NA 36819 33 0 0 0 0
      ERR2207099 NA NA 2344629 13439 0.0 1.0 1.0 0.0
      ERR2207143 NA NA 9221 58 0 0 0 0
      ERR2207279 NA NA 591522 589 0 0 0 0
      ERR2207151 NA NA 25005 19 0 0 0 0
      ERR2207179 NA NA 9131 12 0 0 0 0
      ERR2207349 NA NA 874657 929 0 0 0 0
      ERR2207175 NA NA 2107646 13011 0 0 0 0
      ERR2206988 NA NA 2822832 15430 0.0 0.0 1.0 1.0
      ERR2206991 R1b1a1b1a1a2 R-P312*(xDF27,L356,Z260,L238,CTS12966,DF99,Y18210,ZZ38) 1996299 12178 1.0 1.0 1.0 1.0
      ERR2207221 R1b1a1b1a1 R-CTS7650*(xYSC0000054,S1746,S22641,L1231,L743,FGC11793,FGC5782) 184096 177 1.0 1.0 1.0 1.0
      ERR2207010 R1b1a1b1a1a R-L151*(xZ21,CTS8234,A431,S255,PF6584,L1358,MC21,A41,A98,CTS6838,ZS4584,Z21269,CTS3087,A716,A67,S6191,FGC55509,BY19856) 108134 436 1.0 1.0 1.0 1.0
      ERR2207215 NA NA 1824783 10160 0.0 0.0 1.0 1.0
      ERR2207083 NA NA 59505 65 0 0 0 0
      ERR2207254 NA NA 349936 461 0 0 0 0
      ERR2207127 I2a1b1~ I-FGC3552/etc*(xY4160,Y4717,CTS10100,Y6103) 487361 1801 1.0 1.0 1.0 1.0
      ERR2207065 R1b1a1b1a1a2b1 R-L2*(xZ52,S1480,FGC12403) 372043 1522 1.0 1.0 1.0 1.0
      ERR2207032 NA NA 1378019 9643 0.0 0.0 1.0 1.0
      ERR2207184 NA NA 148571 157 0 0 0 0
      ERR2207056 NA NA 1146565 1928 0 0 0 0
      ERR2207149 NA NA 11996 7 0 0 0 0
      ERR2207278 NA NA 987015 935 0 0 0 0
      ERR2207113 R1b1a1b R-L150.1/etc*(xM405,M153,S457,L165,CTS6519.1,S7402,Z37,L744,BY39387,Z16357,BY554,M2775,S1115,A1154,L226,BY279,FGC17449,CTS5519,ZS5732^^,A67,FGC15494,Z16308,FGC63908,BY19856,A172,Z29769) 199673 912 1.0 1.0 1.0 1.0
      ERR2207011 NA NA 2949029 16936 0.0 0.0 1.0 1.0
      ERR2207092 R1b1a1b R-CTS1416^^/etc*(xFGC14886,A7409,Z350,Z21,Y10790,Y7369,S1746,S22641,L1231,L356,FGC5541,BY16694) 396902 589 1.0 1.0 1.0 1.0
      ERR2207303 NA NA 189107 191 0 0 0 0
      ERR2207280 NA NA 3007872 16279 0.0 0.0 1.0 0.0
      ERR2207001 NA NA 3063685 16776 0.0 0.0 1.0 1.0
      ERR2207148 NA NA 18998 21 0 0 0 0
      ERR2206960 R1b1a1b1a1a2 R-P312*(xL1231,L356,S471,DF19,Y18211,ZZ38) 3350688 15254 1.0 1.0 1.0 1.0
      ERR2207038 NA NA 199556 150 0 0 0 0
      ERR2207197 NA NA 11254 9 0 0 0 0
      ERR2207307 NA NA 2804482 15196 0 0 0 0
      ERR2207182 NA NA 205444 1372 0.0 0.0 1.0 1.0
      ERR2207277 NA NA 2432037 14026 0 0 0 0
      ERR2207051 NA NA 315796 285 0 0 0 0
      ERR2207350 R1b R-L822/etc*(xL761,PH2274) 1203199 7703 1.0 1.0 1.0 1.0
      ERR2207003 NA NA 3415627 18209 0.0 1.0 1.0 0.0
      ERR2206971 NA NA 681834 461 0 0 0 0
      ERR2207242 NA NA 171726 936 0.0 0.0 1.0 1.0
      ERR2207170 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,L238,CTS12966,DF99,Y18213,ZZ38) 2269615 13062 1.0 1.0 1.0 1.0
      ERR2206999 NA NA 641885 655 0 0 0 0
      ERR2207048 NA NA 25350 103 0 0 0 0
      ERR2206984 R1b1a1b1a1a2 R-P312*(xL1231,FGC22963,S259,L1358,FGC19851,FGC7928^^,A822,CTS2501,L743,Z18064.1,BY1811,FGC36538,FGC5782,L130,BY35675,L1315) 443611 677 1.0 1.0 1.0 1.0
      ERR2207191 NA NA 29630 28 0 0 0 0
      ERR2206978 R1b1a1b R-PF6430/etc*(xZ375,L884.2,S25234,A6402,Z160,S517,S17564,FGC19760,Z347,S22641,FGC415,S12025,S26140,L1231,L20,Z49,S206,PF6584,FGC5557,A94,BY2585,FGC37092,CTS5981,S12460,BY16686,PF7566) 706611 2252 1.0 1.0 1.0 1.0
      ERR2207041 R1b1a1b1a1a2 R-P312*(xL1231,L409,CTS5531,PF6578,S259,CTS7193.2,L1358,Z260,Z2248,DF99,ZZ38) 1379627 8025 1.0 1.0 1.0 1.0
      ERR2206983 NA NA 3516101 19321 0.0 0.0 1.0 1.0
      ERR2207150 G2 G-F1647/etc*(xFGC587,PF3185,Z38846,FT63502,Z44915,FGC54492,SK1158,FT10323,BY162854,BY170346,Z45456,FT24217,FGC14523,Z40540,Z45488,Z31356,Z3388,Z17904,FT63608,FGC65096,Z44948,Z40469,Z31383,FGC52638,M3201,FGC3032) 128050 543 1.0 1.0 1.0 1.0
      ERR2207076 R1b1a1 R-CTS5577*(xA9455,ZS347,Z16408,M2775) 18122 116 1.0 1.0 1.0 1.0
      ERR2206957 R1b1a1b1a1 R-P311*(xCTS11549,S17910,S10817,S21607,S22641,FGC396,PF7595,L628,L881,F1343,FGC5007,FGC22513,F1493.2,Z2963,A97,Z16333,S7835,Z16355,Z17628,Z16374,A6507,BY4050,L627,Y23532,A11730,L130,FGC55509,BY39710,A6492,BY12130,FGC33372,BY2586,ZZ38) 137551 913 1.0 1.0 1.0 1.0
      ERR2207194 NA NA 967765 5355 0 0 0 0
      ERR2207213 NA NA 595188 619 0 0 0 0
      ERR2207264 R1b R-CTS2134/etc*(xL1068,BY14356) 3871787 18120 1.0 1.0 1.0 1.0
      ERR2207067 R1b R-M343*(xY20753,FGC14886,S25234,FGC36538,BY3300,A129,A176,AM01878,GG480,BY21441,FGC39701) 118018 342 1.0 1.0 1.0 1.0
      ERR2207291 NA NA 251110 1730 0 0 0 0
      ERR2206975 R1b1a1b1a1a2 R-P312*(xL1231,L356,S471,Z2248,L1199,DF99,Y18212,ZZ38) 2995411 15298 1.0 1.0 1.0 1.0
      ERR2207072 NA NA 2108156 12852 0.0 0.0 1.0 1.0
      ERR2207005 NA NA 341252 296 0 0 0 0
      ERR2206992 NA NA 31529 56 0 0 0 0
      ERR2207302 NA NA 38269 52 0 0 0 0
      ERR2207160 NA NA 272395 267 0 0 0 0
      ERR2207018 R1b1a1b1a1a2 R-P312*(xDF27,L356,S245,L238,DF99,Y18213,ZZ38) 3000496 16046 1.0 1.0 1.0 1.0
      ERR2207289 I2a I-CTS4039*(xCTS8968,Y19473,Y22950,Y18116,Y18290,Y4763,BY93658) 54372 283 1.0 1.0 1.0 1.0
      ERR2207328 R1a1a1~ R-PF7530*(xCTS11962.1,A11452,FGC19240,FGC21231,YP315,FGC11912,YP407,FGC28673,YP1179,Y16257,AM01870) 124556 898 1.0 1.0 1.0 1.0
      ERR2206962 R1b1a1b1a1a R-L151*(xM405,M228.1,AM01878,A8053) 1621353 9817 1.0 1.0 1.0 1.0
      ERR2207216 NA NA 3730517 16752 0.0 0.0 1.0 1.0
      ERR2207086 R1b1a1b1a1a2b1 R-L2*(xS372,L196,S370,S7402,FGC42117) 1035912 6206 1.0 1.0 1.0 1.0
      ERR2207327 NA NA 1410648 8516 0.0 0.0 1.0 1.0
      ERR2207319 NA NA 162624 253 0 0 0 0
      ERR2207337 NA NA 48944 56 0 0 0 0
      ERR2207102 NA NA 2670313 15046 0.0 0.0 1.0 1.0
      ERR2207117 R1b1a1b1a1a2b3 R-PF6601 804817 610 1.0 1.0 1.0 1.0
      ERR2207070 R1b1a1b1a1 R-CTS7650*(xS22641,S362,L628,L356,L192.1) 274370 286 1.0 1.0 1.0 1.0
      ERR2207146 R1b1a1b R-PF6462/etc*(xFGC14884,A1243,A226,M467,CTS11549,Z27,FGC415,S12025,A2148,S357,S362,BY132,F3867.2,L2,PF6584,CTS7193.2,L1358,S471,ZZ38,A8056,FGC37090,A11725,GG644,FGC31933) 534585 2441 1.0 1.0 1.0 1.0
      ERR2207236 NA NA 640580 575 0 0 0 0
      ERR2207189 NA NA 42653 37 0 0 0 0
      ERR2207053 NA NA 111795 151 0 0 0 0
      ERR2207234 R1b1a1b1a1a2 R-P312*(xDF27,L356,S471,L644,DF99,Y18211,ZZ38) 2080848 11776 1.0 1.0 1.0 1.0
      ERR2207262 NA NA 20667 38 0 0 0 0
      ERR2207284 R1b1a1b1a1 R-CTS7650*(xAMM490.2,Y10790,S1746,S22641,FGC396,L1231,L356,L192.1,L644,Y18213,FGC37092) 689979 862 1.0 1.0 1.0 1.0
      ERR2207249 R1b1a1b R-CTS1416^^/etc*(xL884.2,Y10790,S1743,L1231,L356,BY281,A11313,Z18064.1,Z17836,FGC11793,A159,A6464,S3106,CTS8704,FGC43487,FGC33973,FGC33060,L130,FGC58883,FGC11358^^,L1315,CTS7556) 682152 732 1.0 1.0 1.0 1.0
      ERR2207161 NA NA 36556 43 0 0 0 0
      ERR2207006 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,Z2248,L1199,DF99,Y18211,ZZ38) 2708173 15857 1.0 1.0 1.0 1.0
      ERR2207309 NA NA 69879 54 0 0 0 0
      ERR2207260 R1b1a1b1a1a2c1 R-L459*(xS653,BY281,FGC13017,FGC43481) 32454 238 1.0 1.0 1.0 1.0
      ERR2207246 R1b1a1b R-PF6462/etc*(xS263,DF27,L356,L192.1,Z44612,BY16688) 428567 491 1.0 1.0 1.0 1.0
      ERR2206961 R1b1a1b1a1a2 R-P312*(xL1231,L356,S471,Z2245,DF19,DF99,Y18210,ZZ38) 4139174 20539 1.0 1.0 1.0 1.0
      ERR2207063 NA NA 38785 42 0 0 0 0
      ERR2207021 NA NA 2728012 14630 0.0 0.0 1.0 1.0
      ERR2207340 NA NA 3153562 16273 0 0 0 0
      ERR2207015 NA NA 619793 568 0 0 0 0
      ERR2207155 NA NA 61268 64 0 0 0 0
      ERR2207208 NA NA 792046 5249 0.0 0.0 1.0 1.0
      ERR2207111 NA NA 13436 46 0 0 0 0
      ERR2207060 NA NA 9687 15 0 0 0 0
      ERR2207129 NA NA 485956 290 0 0 0 0
      ERR2207019 NA NA 1622625 10216 0.0 0.0 1.0 1.0
      ERR2207043 NA NA 281578 280 0 0 0 0
      ERR2207214 NA NA 392389 421 0 0 0 0
      ERR2207132 R1b1a1b1a1a2 R-P312*(xL1231,L356,S245,DF19,ZZ38) 1589258 7537 1.0 1.0 1.0 1.0
      ERR2207059 NA NA 12166 24 0 0 0 0
      ERR2207334 NA NA 2610588 14336 0 0 0 0
      ERR2207343 G2a2a1a2a2a1 G-Z31430*(xBY21535) 938590 4479 1.0 1.0 1.0 1.0
      ERR2207167 NA NA 3037053 16084 0.0 0.0 1.0 1.0
      ERR2207199 NA NA 1534631 8954 0 0 0 0
      ERR2206997 NA NA 971180 4005 0.0 0.0 1.0 1.0
      ERR2207133 NA NA 12951 16 0 0 0 0
      ERR2207273 R1b1a1b1a1 R-CTS7650*(xS263,FGC391,L1231,L356,FGC7998,L743,BY404,FGC11793,A159,FGC18027,CTS8704,FGC11355,L1315) 751846 607 1.0 1.0 1.0 1.0
      ERR2207313 NA NA 2633280 15059 0 0 0 0
      ERR2207247 NA NA 1873049 11029 0.0 0.0 1.0 0.0
      ERR2207171 NA NA 2949433 14739 0.0 0.0 1.0 1.0
      ERR2206964 NA NA 486082 381 0 0 0 0
      ERR2207235 NA NA 2760729 15673 0.0 0.0 1.0 1.0
      ERR2207223 NA NA 37304 44 0 0 0 0
      ERR2207202 R1b1a1b1a1 R-L52*(xM405,S227,F1343,DF84,L409,CTS7958,CTS8492,L4,S471,L1200,ZZ38) 860698 3424 1.0 1.0 1.0 1.0
      ERR2207332 NA NA 3379027 17517 0 0 0 0
      ERR2206967 NA NA 813190 785 0 0 0 0
      ERR2207135 NA NA 450850 1969 0 0 0 0
      ERR2207094 NA NA 11854 35 0 0 0 0
      ERR2207203 NA NA 272717 319 0 0 0 0
      ERR2207347 NA NA 746420 738 0.0 0.0 1.0 1.0
      ERR2207145 NA NA 94695 446 0 0 0 0
      ERR2207341 R1b1a1b1a1 R-PF6540*(xM405,M228.1,A8041,A8058,FGC37110) 790031 5172 1.0 1.0 1.0 1.0
      ERR2207115 NA NA 1023304 6309 0 0 0 0
      ERR2207299 NA NA 727547 682 0 0 0 0
      ERR2207169 R1b1a1b1a1a2 R-P312*(xZ216,CTS7768,Z262,L165,L881,F1343,DF81,L356,A228,Z2248,DF99,ZZ38) 1092712 6832 1.0 1.0 1.0 1.0
      ERR2207028 R1b1a1b1a1a R-L151*(xAM01884,DF95,S263,S11542,M228.1) 299431 1189 1.0 1.0 1.0 1.0
      ERR2207045 NA NA 57723 91 0 0 0 0
      ERR2207068 NA NA 760237 769 0 0 0 0
      ERR2207335 NA NA 3310014 17108 0 0 0 0
      ERR2207225 R1b1a1b1a1a2 R-P312*(xDF27,L409,CTS188,CTS1595,L4,PF6578,S259,F1493.2,L1358,S471,L238,DF19,DF99,Y18212,ZZ38) 2813262 15783 1.0 1.0 1.0 1.0
      ERR2207183 NA NA 28040 47 0 0 0 0
      ERR2207029 NA NA 68323 51 0 0 0 0
      ERR2207186 NA NA 109347 494 0 0 0 0
      ERR2207204 NA NA 1643075 10500 0.0 0.0 1.0 1.0
      ERR2207106 NA NA 1895576 10899 0.0 0.0 1.0 1.0
      ERR2207081 NA NA 8807 7 0 0 0 0
      ERR2207261 NA NA 9435 16 0 0 0 0
      ERR2207294 NA NA 4242995 18881 0 0 0 0
      ERR2207301 NA NA 1787536 10949 0.0 0.0 1.0 1.0
      ERR2207329 NA NA 3049413 17107 0 0 0 0
      ERR2207123 NA NA 63446 48 0 0 0 0
      ERR2207061 NA NA 2149548 13483 0.0 0.0 1.0 1.0
      ERR2206956 R1b1a1b1a1a2 R-P312*(xL1231,L356,BY247,Z2248,DF99) 1031819 8160 1.0 1.0 1.0 1.0
      ERR2207124 NA NA 857703 2946 0 0 0 0
      ERR2207227 NA NA 2375683 14431 0.0 0.0 1.0 1.0
      ERR2206996 R1b1a1b1a1a1c2b2b1a2 R-S21728 337773 2334 1.0 1.0 1.0 1.0
      ERR2207168 NA NA 13083 11 0 0 0 0
      ERR2206982 NA NA 40792 73 0 0 0 0
      ERR2207027 NA NA 1003116 5819 0.0 0.0 1.0 1.0
      ERR2207193 NA NA 255050 631 0.0 1.0 1.0 0.0
      ERR2207310 NA NA 13099 20 0 0 0 0
      ERR2207252 NA NA 102472 495 0 0 0 0
      ERR2207154 NA NA 45775 23 0 0 0 0
      ERR2207030 NA NA 347803 463 0 0 0 0
      ERR2207281 NA NA 3673063 20431 0 0 0 0
      ERR2206963 R1b1a1b1a1a R-L151*(xAM01882,S265,JFS0001,L493,BY68007,FGC33322,FGC8579,S1671.1,Y10790,A6883,FGC17415,S15565,S23231,PH765,L188,S506,A2426,Z266,L881,S453,L594,S206,L1358,S471,ZZ38,FGC37110) 559841 2469 1.0 1.0 1.0 1.0
      ERR2207075 R1b1a1b R-CTS10349*(xZ375,S383,S370,CTS1789,Z37,DF49,CTS2501,Z16357,Z20764,FGC18038,S883,BY592) 53654 330 1.0 1.0 1.0 1.0
      ERR2206969 NA NA 187361 201 0 0 0 0
      ERR2207320 NA NA 721083 862 0 0 0 0
      ERR2207192 NA NA 165379 486 0.0 1.0 1.0 0.0
      ERR2206990 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,Z2248,L1199,DF99,Y18213,ZZ38) 2499123 14503 1.0 1.0 1.0 1.0
      ERR2206954 NA NA 232589 201 0 0 0 0
      ERR2206952 R1b1a1b1a1 R-P310*(xA560,A1243,S24013,S15627,DF93,L45,CTS11549,S379,FGC396,M228.1,A8058) 245964 1668 1.0 1.0 1.0 1.0
      ERR2207020 R1b1a1b1a1a1c2b2 R-S268*(xS23409,BY118,S26063,S1743) 188682 1124 1.0 1.0 1.0 1.0
      ERR2207131 NA NA 26730 14 0 0 0 0
      ERR2207188 NA NA 95586 438 0 0 0 0
      ERR2206972 NA NA 2788683 16452 0.0 0.0 1.0 1.0
      ERR2207241 I2a1b I-P218*(xY13008,Y7243,Y22356,Y29661,Y7263,Y31134) 88291 403 1.0 1.0 1.0 1.0
      ERR2207259 R1b1a1b1a1a2 R-P312*(xL1231,L2,CTS188,Z37,PF6584,S259,F1493.2,L1358,BY247,Z2248,DF19,DF99,Y18210,ZZ38) 1572048 10336 1.0 1.0 1.0 1.0
      ERR2206995 R1b1a1b1a1a2 R-P312*(xL1245,L356,S245,Z2248,DF19,DF99,Y18210,ZZ38) 2922942 15743 1.0 1.0 1.0 1.0
      ERR2207336 R1b1a1b R-CTS1416^^/etc*(xS263,L1231,Z49,S206,L192.1,CTS9219,BY16684) 691631 883 1.0 1.0 1.0 1.0
      ERR2207141 NA NA 68669 78 0 0 0 0
      ERR2206965 R1b1a1b1a1a R-L151*(xFGC14877,S493,FGC20728,JFS0008,A6709,BY118,FGC12993,S5627,FGC5253,A9456,S17910,FGC19762,S23231,S9342,S1747,CTS8234,S500,FGC427,L1231,L2,CTS4333,S259,S471,L719,ZZ38,A8058,FGC37085) 643193 2577 1.0 1.0 1.0 1.0
      ERR2207104 NA NA 2910172 16848 0 0 0 0
      ERR2207206 R1b1a1b1a1 R-CTS7650*(xS263,L1231,Z49,FGC5606,A11313,FGC5782,S6189,L130) 473953 466 1.0 1.0 1.0 1.0
      ERR2207016 NA NA 676856 598 0 0 0 0
      ERR2207142 NA NA 256518 1559 0 0 0 0
      ERR2207039 R1b1a1b1a1a2 R-P312*(xL409,L564,L644,DF99) 68157 400 1.0 1.0 1.0 1.0
      ERR2207164 R1b1a1b R-CTS10349*(xL884.2,S12035,A9455,S269,S22641,FGC396,S1217,S359,L21,CTS9219) 43528 253 1.0 1.0 1.0 1.0
      ERR2207238 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,Z2248,S233,DF99,Y18213,ZZ38) 2717048 14882 1.0 1.0 1.0 1.0
      ERR2207250 NA NA 2989505 15007 0.0 0.0 1.0 0.0
      ERR2207031 NA NA 1812544 11463 0.0 0.0 1.0 1.0
      ERR2207080 NA NA 400218 256 0 0 0 0
      ERR2207137 NA NA 47076 230 0 0 0 0
      ERR2207014 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,L238,L1199,DF99,Y18213,ZZ38) 2679847 14472 1.0 1.0 1.0 1.0
      ERR2207093 NA NA 60202 68 0 0 0 0
      ERR2207217 NA NA 40351 48 0 0 0 0
      ERR2207166 R1b R-CTS46*(xBY15591,L884.2,Y10790,S1746,L1231,L356,L192.1,BY15360,Y32799) 265750 296 1.0 1.0 1.0 1.0
      ERR2207095 NA NA 18609 76 0 0 0 0
      ERR2207108 NA NA 1640168 10224 0.0 0.0 1.0 1.0
      ERR2207173 NA NA 697296 707 0 0 0 0
      ERR2207091 R1b1a1b1 R-L23*(xL884.2,Z4715,Y10790,S1746,FGC419,L356,L192.1,AM01878,FGC37092) 513383 924 1.0 1.0 1.0 1.0
      ERR2207022 R1b1a1b R-CTS1415^^/etc*(xFGC13260,S1743,S22641,L1231,L356,L459) 537339 515 1.0 1.0 1.0 1.0
      ERR2207331 NA NA 471365 567 0 0 0 0
      ERR2207036 R1b1a1b R-PF6436*(xL884.2,FGC13260,S378,S1743,S22641,Z222,L356,L564) 609773 728 1.0 1.0 1.0 1.0
      ERR2207110 R1b1a1b1 R-L23*(xY10790,S1743,S22641,L1231,L356,L192.1,PF7585) 661567 750 1.0 1.0 1.0 1.0
      ERR2207230 NA NA 484097 491 0 0 0 0
      ERR2207062 NA NA 380072 436 0 0 0 0
      ERR2207298 I2a1b I-L800*(xCTS5279,L39) 165793 1023 1.0 1.0 1.0 1.0
      ERR2207090 NA NA 1466498 8726 0 0 0 0
      ERR2207096 NA NA 368338 464 0 0 0 0
      ERR2207158 NA NA 1429171 9656 0.0 0.0 1.0 1.0
      ERR2207116 NA NA 25834 37 0 0 0 0
      ERR2207339 NA NA 3017786 15562 0 0 0 0
      ERR2207178 NA NA 404715 2586 0 0 0 0
      ERR2207229 R1b1a1b1 R-L23*(xS263,L1231,L356,L564,FGC37113) 660506 649 1.0 1.0 1.0 1.0
      ERR2207125 NA NA 4843 13 0 0 0 0
      ERR2207433 NA NA 213 2 0 0 0 0
      ERR2207079 NA NA 276864 227 0 0 0 0
      ERR2207222 R1b1a1b R-L150.1/etc*(xZ160,S1746,S22641,L1231,L356,FGC5782) 443102 382 1.0 1.0 1.0 1.0
      ERR2207300 NA NA 612775 527 0 0 0 0
      ERR2207253 NA NA 1908084 9830 0 0 0 0
      ERR2207008 NA NA 3311684 17570 0.0 0.0 1.0 1.0
      ERR2206973 NA NA 1589057 9337 0.0 0.0 1.0 1.0
      ERR2207286 R1b1a1b R-CTS1415^^/etc*(xYSC0000054,S263,L1231,L356,FGC7998,FGC11793,CTS8358,FGC5782,FGC43487,FGC42974) 475384 525 1.0 1.0 1.0 1.0
      ERR2207231 NA NA 588903 456 0 0 0 0
      ERR2207107 NA NA 1980307 9250 0.0 0.0 1.0 1.0
      ERR2207177 I2a1a2~ I-AM01260*(xA12014,BY2063,CTS2429) 215331 1237 1.0 1.0 1.0 1.0
      ERR2207058 NA NA 11026 65 0.0 1.0 1.0 0.0
      ERR2207078 NA NA 276382 267 0 0 0 0
      ERR2207055 NA NA 1842573 12001 0.0 0.0 1.0 1.0
      ERR2207134 NA NA 59581 91 0 0 0 0
      ERR2207276 R1b1 R-CTS7585*(xL884.2,S499,S22641,L1231,L356,BY281,L743,FGC11793,FGC5654,S3106,CTS8704,FGC43488,FGC58892,FGC11355,A144,L1315) 582064 623 1.0 1.0 1.0 1.0
      ERR2207174 R1b1 R-CTS7585*(xBY15600,M520,Y125578,PF6323) 289070 360 1.0 1.0 1.0 1.0
      ERR2207073 NA NA 276023 900 0.0 0.0 1.0 1.0
      ERR2206951 NA NA 1069491 896 0.0 0.0 1.0 1.0
      ERR2207047 R1b1a1b R-CTS12478*(xAMM490.2) 13263 58 1.0 1.0 1.0 1.0
      ERR2207139 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,DF19,ZZ38) 867021 5321 1.0 1.0 1.0 1.0
      ERR2207209 NA NA 108377 149 0 0 0 0
      ERR2207046 NA NA 275574 1416 0.0 0.0 1.0 1.0
      ERR2207026 NA NA 24865 32 0 0 0 0
      ERR2206985 R1b1a1b1a1a2 R-P312*(xL1231,L356,BY247,S233,DF99,ZZ38) 1395931 9401 1.0 1.0 1.0 1.0
      ERR2207034 NA NA 1015098 6368 0.0 0.0 1.0 1.0
      ERR2206955 R1b1a1b1a1a2c1 R-L21*(xA98,FGC18026,BY39710,FGC33375,A121) 38041 156 1.0 1.0 1.0 1.0
      ERR2207098 NA NA 588656 2968 0.0 0.0 1.0 1.0
      ERR2207000 NA NA 241527 124 0 0 0 0
      ERR2207035 R1b1a1b1a1a2 R-P312*(xZ272,M167,L881,F1343,DF81,S180,F1493.2,L1358,L459,DF99,ZZ38) 131686 1043 1.0 1.0 1.0 1.0
      ERR2207052 NA NA 8208 7 0 0 0 0
      ERR2207245 NA NA 444676 497 0 0 0 0
      ERR2207147 NA NA 25326 31 0 0 0 0
      ERR2207269 NA NA 211902 181 0 0 0 0
      ERR2206986 R1b1a1b R-CTS12478*(xFGC13260,Y10790,Y7369,S1743,L1231,L356,FGC19851,BY281,Z17836,BY404,BY2743,FGC5782,FGC33973,FGC11355,FGC37113) 721982 570 1.0 1.0 1.0 1.0
      ERR2207007 NA NA 3093731 17439 0.0 0.0 1.0 1.0
      ERR2207013 R1b1a1b1a1a2 R-P312*(xL1231,L356,S245,V1864,DF19,DF99,Y18211,ZZ38) 2635825 14800 1.0 1.0 1.0 1.0
      ERR2207244 I2a1b1 I-M223/etc*(xL369,FGC7173,Y10632,S25360,CTS10057,S9403) 2095413 9931 1.0 1.0 1.0 1.0
      ERR2207285 NA NA 3233468 16346 0 0 0 0
      ERR2207128 NA NA 1279712 4739 0 0 0 0
      ERR2206976 R1b1a1b1a1 R-CTS7650*(xL884.2,Y10790,S1746,S22641,L1231,BY247) 304800 358 1.0 1.0 1.0 1.0
      ERR2207088 R1b1a1b R-F69/etc*(xBY96054,S516,S1747,CTS11567,S490,FGC5007,FGC12403,CTS1789,FGC22513,DF23,Z17830,Z16397,L226,F4036.2,A67,FGC33062,BY2590,BY16698,Y31465) 193339 789 1.0 1.0 1.0 1.0
      ERR2207050 NA NA 99914 90 0 0 0 0
      ERR2206970 NA NA 176397 162 0 0 0 0
      ERR2207089 R1b1a1b1a1 R-CTS7650*(xL884.2,A112,S378,Y10790,Y7369,S1743,S22641,L1231,L356,L564,Z2248,L644,AM01878,FGC37092) 1201600 1412 1.0 1.0 1.0 1.0
      ERR2207037 NA NA 29971 35 0 0 0 0
      ERR2207220 NA NA 193583 210 0 0 0 0
      ERR2207305 NA NA 2244196 14137 0.0 0.0 1.0 1.0
      ERR2207172 NA NA 2809487 15478 0.0 0.0 1.0 1.0
      ERR2207126 NA NA 10430 31 0 0 0 0
      ERR2207321 R1b1a1b1a1a1 R-M405*(xAM01882,L257,DF95,AMM490.2,S25234,L782,M467,L47,Z21,CTS10893,S11300,S15565,FGC19775,S23231,S9342,S1743,S22294,CTS8234,S9891,S500,S22641,FGC427,S12025,A2148,S26140) 2491237 13292 1.0 1.0 1.0 1.0
      ERR2207308 R1b1a1b1a1a2 R-P312*(xL629,L881,F1343,L409,CTS188,Z37,PF6578,F1493.2,L1358,L459,ZZ38) 927021 5590 1.0 1.0 1.0 1.0
      ERR2207233 R1b1a1b1a1 R-CTS7650*(xZ4716,S22641,L1231,L356,S6154,BY281,A11313,Z17836,FGC11793,CTS8358,FGC5782,L130) 539725 600 1.0 1.0 1.0 1.0
      ERR2207240 NA NA 733812 528 0 0 0 0
      ERR2207267 NA NA 665102 482 0 0 0 0
      ERR2207112 NA NA 1738406 10085 0.0 1.0 1.0 0.0
      ERR2207084 NA NA 24763 37 0 0 0 0
      ERR2207270 NA NA 1308283 8555 0.0 0.0 1.0 1.0
      ERR2207322 NA NA 2482875 13776 0 0 0 0
      ERR2207212 R1b1a1b1a1a2 R-P312*(xS450,M167,S453,L739,L196,S1468,FGC12403,L552,CTS1789,FGC31485,PF6584,CTS7193.2,L1358,FGC5512,CTS6919,BY592,Z2245,S233,Y18210) 468596 2742 1.0 1.0 1.0 1.0
      ERR2207256 NA NA 32321 104 0 0 0 0
      ERR2207283 NA NA 2272300 13786 0.0 0.0 1.0 0.0
      ERR2207232 R1b1a1b1a1a2 R-P312*(xS227,F1343,S453,L2,Z37,L100,PF6578,S259,F1493.2,L1358,FGC5533,BY2588,Z2245,Z44612,ZZ38) 828437 5580 1.0 1.0 1.0 1.0
      ERR2207342 NA NA 23210 33 0 0 0 0
      ERR2206966 NA NA 2575353 15351 0.0 0.0 1.0 1.0
      ERR2207165 R1b1a1b1a1a R-PF6543/etc*(xM405,Z272,S457,BY132,L617,S453,L356,S245,DF99,ZZ38,A8055,FGC37110) 878859 5128 1.0 1.0 1.0 1.0
      ERR2207287 NA NA 2723201 15446 0 0 0 0
      ERR2207346 NA NA 2058346 12133 0 0 0 0
      ERR2207324 NA NA 2877895 15477 0 0 0 0
      ERR2207296 NA NA 3196890 16233 0 0 0 0
      ERR2207064 NA NA 133794 99 0 0 0 0
      ERR2207138 NA NA 324992 414 0 0 0 0
      ERR2207316 NA NA 44318 244 0.0 1.0 1.0 0.0
      ERR2207097 NA NA 321209 158 0 0 0 0
      ERR2207085 NA NA 273684 255 0 0 0 0
      ERR2207114 R1b1a1b1a1 R-PF6540*(xS268,S500,PF7595,Z266,L356,L564) 72042 364 1.0 1.0 1.0 1.0
      ERR2207325 NA NA 618727 715 0 0 0 0
      ERR2207219 NA NA 287684 269 0 0 0 0
      ERR2207266 R1b1a1b1a1a2 R-P312*(xL1245,L356,S471,Z2248,L1199,L719,CTS12966,DF99,Y18212,ZZ38) 3413415 17030 1.0 1.0 1.0 1.0
      ERR2207248 NA NA 1296246 6141 0.0 0.0 1.0 1.0
      ERR2207330 NA NA 634135 544 0.0 0.0 1.0 1.0
      ERR2207069 R1b1a1b1a1 R-CTS7650*(xYSC0000054,L884.2,FGC30616,FGC13260,S378,S383,S1743,S22641,L1231,FGC5007,CTS1595,FGC7998,S279,CTS8358,DC10,FGC20560,S3106,FGC5782,FGC58892,FGC11355,L1315,AM01878) 993013 887 1.0 1.0 1.0 1.0
      ERR2207207 NA NA 31100 49 0 0 0 0
      ERR2207025 NA NA 3065736 15086 0.0 0.0 1.0 1.0
      ERR2207004 NA NA 28727 82 0 0 0 0
      ERR2206959 NA NA 2142143 12326 0.0 0.0 1.0 1.0
      ERR2207044 NA NA 22392 72 0 0 0 0
      ERR2207200 NA NA 465755 441 0 0 0 0
      ERR2207314 NA NA 1676546 9950 0.0 0.0 1.0 1.0
      ERR2207243 I2 I-PF3651*(xY3948,Z26781,Z26997,Z27036,A857.2,Y32652,Y32156,S11558,Y130087,BY93658) 44293 219 1.0 1.0 1.0 1.0
      ERR2207292 NA NA 735967 548 0 0 0 0
      ERR2207185 NA NA 881821 5052 0.0 0.0 1.0 1.0
      ERR2207318 NA NA 522737 3768 0.0 0.0 1.0 1.0
      ERR2207251 NA NA 244086 1060 0 0 0 0
      ERR2207100 NA NA 4945235 20848 0.0 0.0 1.0 1.0
      ERR2207087 R1b1a1b R-L749/etc*(xAM01884,Z375,S15627,DF94,Z8180,CTS10893,S23231,S1743,L165,Z37,FGC5524,FGC36428,DF99,Y18210) 289274 1210 1.0 1.0 1.0 1.0
      ERR2207103 R1b1a1b R-L150.1*(xFGC11660,A6709,S378,Y10790,S1746,S22641,L1231,L356,FGC23592,BY281,L743,A6464,FGC5637,FGC5782,S6000,BY35673,L1315,BY11894) 649664 613 1.0 1.0 1.0 1.0
      ERR2206989 NA NA 80931 130 0 0 0 0
      ERR2207272 NA NA 2944033 16872 0 0 0 0
      ERR2207152 R1b1 R-L1345*(xY14184,PF6434,FGC21043) 268862 710 1.0 1.0 1.0 1.0
      ERR2207239 NA NA 1847083 10879 0.0 0.0 1.0 1.0
      ERR2207218 NA NA 12374 12 0 0 0 0
      ERR2207049 NA NA 2040293 12235 0.0 0.0 1.0 1.0
      ERR2207130 NA NA 838422 448 0 0 0 0
      ERR2207144 NA NA 8067 13 0 0 0 0
      ERR2207074 R1b1a1b R-PF6434/etc*(xM405,L289,CTS9219) 258427 800 1.0 1.0 1.0 1.0
      ERR2207333 NA NA 455132 413 0 0 0 0
      ERR2206980 NA NA 997791 931 0 0 0 0
      ERR2207317 NA NA 130018 832 0 0 0 0
      ERR2207176 R1b1a1b1a1a2 R-P312*(xL1231,L409,CTS188,Z37,PF6584,L1358,Z260,Z2245,L1199,DF99,Y18211,ZZ38) 1961670 11535 1.0 1.0 1.0 1.0
      ERR2206958 NA NA 2937687 15728 0.0 0.0 1.0 1.0
      ERR2207288 NA NA 2867234 15793 0 0 0 0
      ERR2206994 NA NA 2545482 14538 0.0 0.0 1.0 1.0
      ERR2207009 R1b1a1b1a1a2 R-P312*(xL1231,L356,Z260,Z2248,DF19,DF99,Y18211,A9063,ZZ38) 3156080 17321 1.0 1.0 1.0 1.0
      ERR2207040 R1b1a1b1a1 R-P310*(xM405,M228.1,A8061,FGC37085) 981016 5644 1.0 1.0 1.0 1.0
      ERR2207105 NA NA 2709003 14567 0.0 0.0 1.0 0.0
      ERR2207237 NA NA 633110 569 0 0 0 0
      ERR2207205 NA NA 44221 53 0 0 0 0
      ERR2207348 NA NA 2593928 14746 0.0 0.0 1.0 1.0
      ERR2207118 R1b1a1b R-CTS623/etc*(xYSC0000054,AMM490.2,S1684,FGC6184,FGC15335,S21495,DF101,S23231,S380,S22641,FGC427,S348,Z264,CTS6519.1,L356,S471,Z29778) 345517 1569 1.0 1.0 1.0 1.0
      ERR2207311 NA NA 178175 218 0.0 1.0 1.0 0.0
      ERR2207162 NA NA 5807 10 0 0 0 0
      ERR2207290 NA NA 3181380 16041 0 0 0 0
      ERR2207312 NA NA 1495319 8060 0 0 0 0
      ERR2207187 NA NA 66192 84 0 0 0 0
      ERR2207180 NA NA 5632 9 0 0 0 0
      ERR2207295 NA NA 3278502 16277 0.0 0.0 1.0 0.0
      ERR2207224 R1b1a1b1a1a2 R-P312*(xDF27,L356,S245,Z2248,L1199,DF99,Y18210,ZZ38) 2414286 14306 1.0 1.0 1.0 1.0
      ERR2207190 NA NA 71402 195 0 0 0 0
      ERR2207054 NA NA 636664 3650 0.0 0.0 1.0 0.0
      ERR2207228 NA NA 537704 507 0 0 0 0
      ERR2206979 NA NA 723185 4225 0.0 0.0 1.0 1.0
      ERR2207153 NA NA 40047 28 0 0 0 0
      ERR2207196 NA NA 1501158 8108 0.0 0.0 1.0 1.0
      ERR2207109 NA NA 150838 847 0.0 0.0 1.0 1.0
      ERR2207274 NA NA 3052207 16636 0 0 0 0
      ERR2207297 NA NA 3182326 16214 0 0 0 0
      ERR2207121 NA NA 3841673 18229 0 0 0 0
      ERR2206998 NA NA 19287 19 0 0 0 0
      ERR2207119 R1b1a1b1a1a R-L151*(xAM01882,S265,S379,S12025,S251,L276,L617,L881,L739,Z29990,Z37,L4,L192.1) 169113 1014 1.0 1.0 1.0 1.0
      ERR2207033 NA NA 22985 42 0 0 0 0
      ERR2206953 NA NA 201663 181 0 0 0 0
      ERR2207275 NA NA 2955756 15546 0 0 0 0
      ERR2207257 NA NA 3526616 15645 0 0 0 0
      ERR2207122 NA NA 51808 82 0 0 0 0
      ERR2207002 NA NA 572904 501 0 0 0 0
      ERR2207344 NA NA 2241438 11875 0.0 0.0 1.0 0.0
      ERR2207071 NA NA 10286 10 0 0 0 0
      ERR2207163 NA NA 12862 7 0 0 0 0
      ERR2207201 R1b1a1b1a R-L51*(xA560,S274,FGC5274,Y10790,S17910,FGC19775,S489,M222,S7835,Z16355,ZS4590,FGC32914,A2070,S6168,Z16307,A172) 100064 612 1.0 1.0 1.0 1.0
      ERR2207268 NA NA 488944 3294 0.0 0.0 1.0 1.0
      ERR2207265 R1b1a1b1a1 R-CTS7650*(xS378,Y10790,S1743,S22641,L1231,L356,L459,Z2248) 780119 819 1.0 1.0 1.0 1.0
      ERR2207306 R1b1a1b1 R-L23*(xL884.2,S378,DF101,Y7369,S1743,S22294,S22641,L1231,L356,M222,S802,FGC5606,P66_2,BY404,A7662,A6464,FGC5654,Y16283,BY3300,FGC5782,FGC43488,L130,BY35673,FGC11355,FGC33376,CTS7556) 536466 940 1.0 1.0 1.0 1.0
      ERR2207120 NA NA 33465 28 0 0 0 0
      ERR2207258 NA NA 604327 3269 0.0 0.0 1.0 1.0
      ERR2207198 R1b R-CTS2229/etc*(xL761,BY14578) 2990741 16502 1.0 1.0 1.0 1.0
      ERR2207157 I2a1b1~ I-CTS10125/etc*(xFGC20062,Y21732,FGC7173,Y4332,Y8952,Y32644,Y13948,FGC17399,BY2075,Y11154,S17264,BY1284,Y36558,Y30846,Y5222,Y6099) 334151 1329 1.0 1.0 1.0 1.0
      ERR2207293 I2a1a2a I-AMM078*(xA12014) 57099 412 1.0 1.0 1.0 1.0
      ERR2207017 NA NA 2631275 15159 0.0 0.0 1.0 1.0
      ERR2207255 NA NA 398424 2242 0.0 0.0 1.0 1.0
      ERR2207211 R1b1a1b1a1a2 R-P312*(xZ18064.1,Z2189,S308,BY19856,A121,A91) 30503 226 1.0 1.0 1.0 1.0
      ERR2207326 R1b1a1b1 R-L23*(xFGC13260,S378,Y10790,Y7369,S1746,S22641,L1231,L409,L564) 389411 447 1.0 1.0 1.0 1.0
      ERR2207181 NA NA 12933 20 0 0 0 0
      ERR2207323 NA NA 602469 578 0 0 0 0
      ERR2206987 NA NA 295847 273 0 0 0 0
Viewing 0 reply threads
  • You must be logged in to reply to this topic.